gov.nih.nci.caarray.external.v1_0.sample
Class Biomaterial
java.lang.Object
gov.nih.nci.caarray.external.v1_0.AbstractCaArrayEntity
gov.nih.nci.caarray.external.v1_0.sample.AbstractExperimentGraphNode
gov.nih.nci.caarray.external.v1_0.sample.Biomaterial
- All Implemented Interfaces:
- java.io.Serializable
public class Biomaterial
- extends AbstractExperimentGraphNode
Biomaterial is an experiment graph node which corresponds to a biomaterial at some stage prior
to being hybridized with the array.
- Author:
- dkokotov
- See Also:
- Serialized Form
Methods inherited from class java.lang.Object |
clone, finalize, getClass, notify, notifyAll, wait, wait, wait |
Biomaterial
public Biomaterial()
getExternalId
public java.lang.String getExternalId()
- Returns:
- an external id. This is an identifier for this biomaterial in some external system. This value should
be unique across biomaterials in the same experiment.
setExternalId
public void setExternalId(java.lang.String externalId)
- Parameters:
externalId
- the external id for this biomaterial.
getDescription
public java.lang.String getDescription()
- Returns:
- a long-form description of this biomaterial
setDescription
public void setDescription(java.lang.String description)
- Parameters:
description
- a long-form description of this biomaterial
getDiseaseState
public TermValue getDiseaseState()
- Returns:
- a term from the MageTAB DiseaseState category defining the disease state for this biomaterial.
setDiseaseState
public void setDiseaseState(TermValue diseaseState)
- Parameters:
diseaseState
- the diseaseState to set
getTissueSite
public TermValue getTissueSite()
- Returns:
- the tissueSite
setTissueSite
public void setTissueSite(TermValue tissueSite)
- Parameters:
tissueSite
- the tissueSite to set
getMaterialType
public TermValue getMaterialType()
- Returns:
- the materialType
setMaterialType
public void setMaterialType(TermValue materialType)
- Parameters:
materialType
- the materialType to set
getCellType
public TermValue getCellType()
- Returns:
- the cellType
setCellType
public void setCellType(TermValue cellType)
- Parameters:
cellType
- the cellType to set
getOrganism
public Organism getOrganism()
- Returns:
- the organism from which this biomaterial was extracted
setOrganism
public void setOrganism(Organism organism)
- Parameters:
organism
- the organism from which this biomaterial was extracted
getCharacteristics
public java.util.Set<Characteristic> getCharacteristics()
- Returns:
- the set of characteristics describing properties of this biomaterial.
setCharacteristics
public void setCharacteristics(java.util.Set<Characteristic> characteristics)
- Parameters:
characteristics
- the set of characteristics describing properties of this biomaterial.
getType
public BiomaterialType getType()
- Returns:
- the type of this biomaterial.
setType
public void setType(BiomaterialType type)
- Parameters:
type
- the type of this biomaterial
getLastModifiedDataTime
public java.util.Date getLastModifiedDataTime()
- Returns:
- the lastModifiedDataTime
setLastModifiedDataTime
public void setLastModifiedDataTime(java.util.Date lastModifiedDataTime)
- Parameters:
lastModifiedDataTime
- the lastModifiedDataTime to set