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gov.nih.* |
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gov.nih.nci.caarray.domain.AbstractCaArrayEntity | ||
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public static final java.lang.String |
CAARRAY_LSID_AUTHORITY |
"caarray.nci.nih.gov" |
public static final java.lang.String |
CAARRAY_LSID_NAMESPACE |
"domain" |
gov.nih.nci.caarray.domain.AbstractCaArrayObject | ||
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public static final int |
DEFAULT_BATCH_SIZE |
20 |
public static final int |
DEFAULT_STRING_COLUMN_SIZE |
254 |
protected static final int |
LARGE_TEXT_FIELD_LENGTH |
2000 |
gov.nih.nci.caarray.domain.array.AbstractProbeAnnotation | ||
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public static final int |
RELATED_BATCH_SIZE |
500 |
gov.nih.nci.caarray.domain.array.Gene | ||
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public static final java.lang.String |
ENSEMBLE |
"Ensemble" |
public static final java.lang.String |
ENTREZ_GENE |
"Entrez Gene" |
public static final java.lang.String |
GENBANK |
"GenBank" |
public static final java.lang.String |
REF_SEQ |
"RefSeq" |
public static final java.lang.String |
THC |
"THC" |
public static final java.lang.String |
UNIGENE |
"UniGene" |
gov.nih.nci.caarray.domain.array.MiRNAProbeAnnotation | ||
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public static final java.lang.String |
MIR |
"mir" |
gov.nih.nci.caarray.domain.audit.AuditLogSecurity | ||
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public static final java.lang.String |
GROUP |
"Group" |
public static final java.lang.String |
PROJECT |
"Project" |
gov.nih.nci.caarray.domain.data.AbstractDataColumn | ||
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protected static final java.lang.String |
ERROR_NOT_INITIALIZED |
"Cannot get uninitialized values array - must be loaded from DataStorage" |
protected static final java.lang.String |
SEPARATOR |
" " |
gov.nih.nci.caarray.domain.data.DerivedArrayData | ||
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public static final java.lang.String |
DISCRIMINATOR |
"DERIVED" |
gov.nih.nci.caarray.domain.data.RawArrayData | ||
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public static final java.lang.String |
DISCRIMINATOR |
"RAW" |
gov.nih.nci.caarray.domain.project.Experiment | ||
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public static final java.lang.String |
BIOMATERIAL_FILTER_NAME |
"BiomaterialFilter" |
public static final java.lang.String |
EXTRACTS_FILTER |
"id in (select e.ID from biomaterial e inner join sampleextract se on e.id = se.extract_id inner join biomaterial s on se.sample_id = s.id where e.discriminator = \'EX\' and s.ID in (select t.attribute_value from csm_sample_id_group t where t.group_id IN (:GROUP_NAMES) and t.privilege_id=3))" |
public static final java.lang.String |
LABELED_EXTRACTS_FILTER |
"id in (select le.ID from biomaterial le inner join extractlabeledextract ele on le.id = ele.labeledextract_id inner join sampleextract se on ele.extract_id = se.extract_id inner join biomaterial s on se.sample_id = s.id where le.discriminator = \'LA\' and s.ID in (select t.attribute_value from csm_sample_id_group t where t.group_id IN (:GROUP_NAMES) and t.privilege_id=3))" |
public static final java.lang.String |
SAMPLES_FILTER |
"id in (select s.ID from biomaterial s where s.discriminator = \'SA\' and s.ID in (select t.attribute_value from csm_sample_id_group t where t.group_id IN (:GROUP_NAMES) and t.privilege_id=3))" |
public static final java.lang.String |
SECURITY_FILTER_NAME |
"Project1" |
gov.nih.nci.caarray.domain.project.ExperimentContact | ||
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public static final java.lang.String |
MAIN_POC_ROLE |
"submitter" |
public static final java.lang.String |
PI_ROLE |
"investigator" |
gov.nih.nci.caarray.domain.sample.Extract | ||
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public static final java.lang.String |
DISCRIMINATOR |
"EX" |
gov.nih.nci.caarray.domain.sample.LabeledExtract | ||
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public static final java.lang.String |
DISCRIMINATOR |
"LA" |
gov.nih.nci.caarray.domain.sample.Sample | ||
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public static final java.lang.String |
DISCRIMINATOR |
"SA" |
gov.nih.nci.caarray.domain.sample.Source | ||
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public static final java.lang.String |
DISCRIMINATOR |
"SO" |
gov.nih.nci.caarray.services.arraydesign.ArrayDesignDetailsService | ||
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public static final java.lang.String |
JNDI_NAME |
"caarray/ArrayDesignDetailsServiceBean/remote" |
gov.nih.nci.caarray.services.data.DataRetrievalService | ||
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public static final java.lang.String |
JNDI_NAME |
"caarray/DataRetrievalServiceBean/remote" |
gov.nih.nci.caarray.services.file.FileRetrievalService | ||
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public static final java.lang.String |
JNDI_NAME |
"caarray/FileRetrievalServiceBean/remote" |
gov.nih.nci.caarray.services.search.CaArraySearchService | ||
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public static final java.lang.String |
JNDI_NAME |
"caarray/CaArraySearchServiceBean/remote" |
gov.nih.nci.caarray.util.CaArrayAuditLogInterceptor | ||
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public static final java.lang.String |
SEQUENCE_NAME |
"AUDIT_ID_SEQ" |
gov.nih.nci.caarray.util.CaarrayInnoDBDialect | ||
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public static final java.lang.String |
FILTER_ALIAS |
"__caarray_filter_alias__" |
gov.nih.nci.caarray.util.owlparser.ParseMgedOntology | ||
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public static final java.lang.String |
MGED_OWL_PATH |
"/MGEDOntology.owl" |
public static final java.lang.String |
MGED_URL |
"http://mged.sourceforge.net/ontologies/MGEDontology.php" |
public static final java.lang.String |
SQL_FILE_NAME |
"populate-mged.sql" |
gov.nih.nci.cagrid.caarray.common.CaArraySvcConstantsBase | ||
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public static final java.lang.String |
SERVICE_NS |
"http://caarray.cagrid.nci.nih.gov/CaArraySvc" |
gov.nih.nci.cagrid.caarray.service.globus.CaArraySvcAuthorization | ||
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public static final java.lang.String |
SERVICE_NAMESPACE |
"http://caarray.cagrid.nci.nih.gov/CaArraySvc" |
gov.nih.nci.cagrid.caarray.service.globus.resource.ResourceConstants | ||
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public static final java.lang.String |
SERVICE_NS |
"http://caarray.cagrid.nci.nih.gov/CaArraySvc" |
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