Constant Field Values


Contents
gov.nih.*

gov.nih.nci.caarray.domain.AbstractCaArrayEntity
public static final java.lang.String CAARRAY_LSID_AUTHORITY "caarray.nci.nih.gov"
public static final java.lang.String CAARRAY_LSID_NAMESPACE "domain"

gov.nih.nci.caarray.domain.AbstractCaArrayObject
public static final int DEFAULT_BATCH_SIZE 20
public static final int DEFAULT_STRING_COLUMN_SIZE 254
protected static final int LARGE_TEXT_FIELD_LENGTH 2000

gov.nih.nci.caarray.domain.array.AbstractProbeAnnotation
public static final int RELATED_BATCH_SIZE 500

gov.nih.nci.caarray.domain.array.Gene
public static final java.lang.String ENSEMBLE "Ensemble"
public static final java.lang.String ENTREZ_GENE "Entrez Gene"
public static final java.lang.String GENBANK "GenBank"
public static final java.lang.String REF_SEQ "RefSeq"
public static final java.lang.String THC "THC"
public static final java.lang.String UNIGENE "UniGene"

gov.nih.nci.caarray.domain.array.MiRNAProbeAnnotation
public static final java.lang.String MIR "mir"

gov.nih.nci.caarray.domain.audit.AuditLogSecurity
public static final java.lang.String GROUP "Group"
public static final java.lang.String PROJECT "Project"

gov.nih.nci.caarray.domain.data.AbstractDataColumn
protected static final java.lang.String ERROR_NOT_INITIALIZED "Cannot get uninitialized values array - must be loaded from DataStorage"
protected static final java.lang.String SEPARATOR " "

gov.nih.nci.caarray.domain.data.DerivedArrayData
public static final java.lang.String DISCRIMINATOR "DERIVED"

gov.nih.nci.caarray.domain.data.RawArrayData
public static final java.lang.String DISCRIMINATOR "RAW"

gov.nih.nci.caarray.domain.project.Experiment
public static final java.lang.String BIOMATERIAL_FILTER_NAME "BiomaterialFilter"
public static final java.lang.String EXTRACTS_FILTER "id in (select e.ID from biomaterial e inner join sampleextract se on e.id = se.extract_id inner join biomaterial s on se.sample_id = s.id where e.discriminator = \'EX\' and s.ID in (select t.attribute_value from csm_sample_id_group t where t.group_id IN (:GROUP_NAMES) and t.privilege_id=3))"
public static final java.lang.String LABELED_EXTRACTS_FILTER "id in (select le.ID from biomaterial le inner join extractlabeledextract ele on le.id = ele.labeledextract_id inner join sampleextract se on ele.extract_id = se.extract_id inner join biomaterial s on se.sample_id = s.id where le.discriminator = \'LA\' and s.ID in (select t.attribute_value from csm_sample_id_group t where t.group_id IN (:GROUP_NAMES) and t.privilege_id=3))"
public static final java.lang.String SAMPLES_FILTER "id in (select s.ID from biomaterial s where s.discriminator = \'SA\' and s.ID in (select t.attribute_value from csm_sample_id_group t where t.group_id IN (:GROUP_NAMES) and t.privilege_id=3))"
public static final java.lang.String SECURITY_FILTER_NAME "Project1"

gov.nih.nci.caarray.domain.project.ExperimentContact
public static final java.lang.String MAIN_POC_ROLE "submitter"
public static final java.lang.String PI_ROLE "investigator"

gov.nih.nci.caarray.domain.sample.Extract
public static final java.lang.String DISCRIMINATOR "EX"

gov.nih.nci.caarray.domain.sample.LabeledExtract
public static final java.lang.String DISCRIMINATOR "LA"

gov.nih.nci.caarray.domain.sample.Sample
public static final java.lang.String DISCRIMINATOR "SA"

gov.nih.nci.caarray.domain.sample.Source
public static final java.lang.String DISCRIMINATOR "SO"

gov.nih.nci.caarray.services.arraydesign.ArrayDesignDetailsService
public static final java.lang.String JNDI_NAME "caarray/ArrayDesignDetailsServiceBean/remote"

gov.nih.nci.caarray.services.data.DataRetrievalService
public static final java.lang.String JNDI_NAME "caarray/DataRetrievalServiceBean/remote"

gov.nih.nci.caarray.services.file.FileRetrievalService
public static final java.lang.String JNDI_NAME "caarray/FileRetrievalServiceBean/remote"

gov.nih.nci.caarray.services.search.CaArraySearchService
public static final java.lang.String JNDI_NAME "caarray/CaArraySearchServiceBean/remote"

gov.nih.nci.caarray.util.CaArrayAuditLogInterceptor
public static final java.lang.String SEQUENCE_NAME "AUDIT_ID_SEQ"

gov.nih.nci.caarray.util.CaarrayInnoDBDialect
public static final java.lang.String FILTER_ALIAS "__caarray_filter_alias__"

gov.nih.nci.caarray.util.owlparser.ParseMgedOntology
public static final java.lang.String MGED_OWL_PATH "/MGEDOntology.owl"
public static final java.lang.String MGED_URL "http://mged.sourceforge.net/ontologies/MGEDontology.php"
public static final java.lang.String SQL_FILE_NAME "populate-mged.sql"

gov.nih.nci.cagrid.caarray.common.CaArraySvcConstantsBase
public static final java.lang.String SERVICE_NS "http://caarray.cagrid.nci.nih.gov/CaArraySvc"

gov.nih.nci.cagrid.caarray.service.globus.CaArraySvcAuthorization
public static final java.lang.String SERVICE_NAMESPACE "http://caarray.cagrid.nci.nih.gov/CaArraySvc"

gov.nih.nci.cagrid.caarray.service.globus.resource.ResourceConstants
public static final java.lang.String SERVICE_NS "http://caarray.cagrid.nci.nih.gov/CaArraySvc"