public java.lang.Boolean getCreateConceptForObjectProp()
Returns the value of field 'createConceptForObjectProp'. The
field 'createConceptForObjectProp' has the following
description: Controls whether concept entities are created
for object properties defined in
the OWL source. The default is false.
Returns:
the value of field 'CreateConceptForObjectProp'.
getDatatypePropSwitch
public java.lang.String getDatatypePropSwitch()
Returns the value of field 'datatypePropSwitch'. The field
'datatypePropSwitch' has the following description: Controls
how data type properties are converted to components of the
LexGrid
model. If 'association' is specified, each data type
property is recorded in LexGrid as
an entity-to-entity relationship. If 'conceptProperty' is
specified, traditional
LexGrid properties are created and assigned directly to new
entities . If 'both'
is specified, both entity relationships and standard
LexGrid entity properties
are generated. The default is 'both'.
Returns:
the value of field 'DatatypePropSwitch'.
getIsDBXrefRepform
public java.lang.Boolean getIsDBXrefRepform()
Returns the value of field 'isDBXrefRepform'. The field
'isDBXrefRepform' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference) and source, this preference allows for
identification of representational
form cross reference information in xml element text. If
not specified, the default
of 'false' is assumed.
Returns:
the value of field 'IsDBXrefRepform'.
getIsDBXrefSource
public java.lang.Boolean getIsDBXrefSource()
Returns the value of field 'isDBXrefSource'. The field
'isDBXrefSource' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference) and source, this preference allows for
identification of ISBN cross
reference information in xml element text. If not
specified, the default
of 'false' is assumed.
Returns:
the value of field 'IsDBXrefSource'.
getMatchConceptCode
public java.lang.String getMatchConceptCode()
Returns the value of field 'matchConceptCode'. The field
'matchConceptCode' has the following description: This
preference allows for entity codes to be derived from a
specific RDF
property. The provided string is interpreted as a regular
expression to be
compared against properties assigned to each processed
class. If a
property name matches the regular expression, the property
value
is assigned as the entity code. If not specified no default
match is
assumed, and the entity code is derived from the RDF
resource name.
Returns:
the value of field 'MatchConceptCode'.
getMatchConceptStatus
public java.lang.String getMatchConceptStatus()
Returns the value of field 'matchConceptStatus'. The field
'matchConceptStatus' has the following description: This
preference allows for entity status to be derived from a
specific RDF
property. The provided string is interpreted as a regular
expression to be
compared against properties assigned to each processed
class. If a
property name matches the regular expression, the property
value
is assigned as the entity status. If not specified, the
regular expression
of ('concept_status') is assumed, and if not matched no
status string
is assigned (the isActive boolean flag will still be set
based on
deprecation).
Returns:
the value of field 'MatchConceptStatus'.
getMatchNoopNamespaces
public java.lang.String getMatchNoopNamespaces()
Returns the value of field 'matchNoopNamespaces'. The field
'matchNoopNamespaces' has the following description: This
preference allows for classes to be selectively ignored on
import to LexGrid.
The provided string is interpreted as a regular expression
to be compared
against class namespace. If matched, a counterpart entity
is not created in the
LexGrid coding scheme. If not provided, the expression
'(:|@_:|protege:|xsp:).'
is assumed.
Returns:
the value of field 'MatchNoopNamespaces'.
getMatchRootName
public java.lang.String getMatchRootName()
Returns the value of field 'matchRootName'. The field
'matchRootName' has the following description: This
preference allows for custom declaration of root concepts
for hierarchical
relationships. The provided string is interpreted as a
regular expression to be
compared against the resource name for each class. If
matched, the node is
designated as a root in the supported hierarchy metadata.
If not specified,
root nodes are identified by having a superclass of
owl:thing.
Returns:
the value of field 'MatchRootName'.
getMatchXMLRepformNames
public java.lang.String getMatchXMLRepformNames()
Returns the value of field 'matchXMLRepformNames'. The field
'matchXMLRepformNames' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference), this preference allows for identification of
representational form
names contained by XML fragments embedded within rdf
property text.
The provided string is interpreted as a regular expression
and compared
against the XML tags in each fragment. If not specified,
the default
expression '(term-group)' is assumed.
Returns:
the value of field 'MatchXMLRepformNames'.
getMatchXMLSourceNames
public java.lang.String getMatchXMLSourceNames()
Returns the value of field 'matchXMLSourceNames'. The field
'matchXMLSourceNames' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference), this preference allows for identification of
source names contained
by XML fragments embedded within rdf property text. The
provided string is
interpreted as a regular expression and compared against
the XML tags in
each fragment. If not specified, the default expression
'(term-source|def-source)'
is assumed.
Returns:
the value of field 'MatchXMLSourceNames'.
getMatchXMLTextNames
public java.lang.String getMatchXMLTextNames()
Returns the value of field 'matchXMLTextNames'. The field
'matchXMLTextNames' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference), this preference allows for identification of
descriptive text contained
by XML fragments embedded within rdf property text. The
provided string is
interpreted as a regular expression and compared against
the XML tags in
each fragment. If not specified, the default expression
'(term-name|def-definition|go-term)'
is assumed.
Returns the value of field 'prioritizedPresentationNames'.
Returns:
the value of field 'PrioritizedPresentationNames'.
getProcessComplexProps
public java.lang.Boolean getProcessComplexProps()
Returns the value of field 'processComplexProps'. The field
'processComplexProps' has the following description:
Indicates whether rdf property text will be evaluated to
detect and process
embedded XML. This is a master switch controlling whether
the MatchXML
and isDBXRef preferences are acknowledged. The default is
false.
Returns:
the value of field 'ProcessComplexProps'.
getPropnamePrimitive
public java.lang.String getPropnamePrimitive()
Returns the value of field 'propnamePrimitive'. The field
'propnamePrimitive' has the following description: Entities
can be assigned a property that indicates whether or not it
is
considered primitive (having no equivalent classes). This
preference controls
the name of the property that is created; the property
value will indicate
true or false. If not specified, the name 'primitive' is
assumed.
Returns:
the value of field 'PropnamePrimitive'.
getPropnameType
public java.lang.String getPropnameType()
Returns the value of field 'propnameType'. The field
'propnameType' has the following description: Anonymous OWL
classes of type OWLNAryLogicalClass can be assigned
properties that indicate the nature or type of component
logical operations.
This preference controls the name of the property that is
created; the
property value will indicate the logical operation (e.g.
owl:oneOf). If not
specified, the name 'type' is assumed.
Returns:
the value of field 'PropnameType'.
getStrictOWLImplementation
public java.lang.Boolean getStrictOWLImplementation()
Returns the value of field 'strictOWLImplementation'. The
field 'strictOWLImplementation' has the following
description: Controls the relationship between restrictions
of anonymous classes and parent concepts.
If true, restrictions for anonymous classes are not
connected to the parent concepts.
The default is false.
Returns:
the value of field 'StrictOWLImplementation'.
isCreateConceptForObjectProp
public java.lang.Boolean isCreateConceptForObjectProp()
Returns the value of field 'createConceptForObjectProp'. The
field 'createConceptForObjectProp' has the following
description: Controls whether concept entities are created
for object properties defined in
the OWL source. The default is false.
Returns:
the value of field 'CreateConceptForObjectProp'.
isIsDBXrefRepform
public java.lang.Boolean isIsDBXrefRepform()
Returns the value of field 'isDBXrefRepform'. The field
'isDBXrefRepform' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference) and source, this preference allows for
identification of representational
form cross reference information in xml element text. If
not specified, the default
of 'false' is assumed.
Returns:
the value of field 'IsDBXrefRepform'.
isIsDBXrefSource
public java.lang.Boolean isIsDBXrefSource()
Returns the value of field 'isDBXrefSource'. The field
'isDBXrefSource' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference) and source, this preference allows for
identification of ISBN cross
reference information in xml element text. If not
specified, the default
of 'false' is assumed.
Returns:
the value of field 'IsDBXrefSource'.
isProcessComplexProps
public java.lang.Boolean isProcessComplexProps()
Returns the value of field 'processComplexProps'. The field
'processComplexProps' has the following description:
Indicates whether rdf property text will be evaluated to
detect and process
embedded XML. This is a master switch controlling whether
the MatchXML
and isDBXRef preferences are acknowledged. The default is
false.
Returns:
the value of field 'ProcessComplexProps'.
isStrictOWLImplementation
public java.lang.Boolean isStrictOWLImplementation()
Returns the value of field 'strictOWLImplementation'. The
field 'strictOWLImplementation' has the following
description: Controls the relationship between restrictions
of anonymous classes and parent concepts.
If true, restrictions for anonymous classes are not
connected to the parent concepts.
The default is false.
Returns:
the value of field 'StrictOWLImplementation'.
setCreateConceptForObjectProp
public void setCreateConceptForObjectProp(java.lang.Boolean createConceptForObjectProp)
Sets the value of field 'createConceptForObjectProp'. The
field 'createConceptForObjectProp' has the following
description: Controls whether concept entities are created
for object properties defined in
the OWL source. The default is false.
Parameters:
createConceptForObjectProp - the value of field
'createConceptForObjectProp'.
setDatatypePropSwitch
public void setDatatypePropSwitch(java.lang.String datatypePropSwitch)
Sets the value of field 'datatypePropSwitch'. The field
'datatypePropSwitch' has the following description: Controls
how data type properties are converted to components of the
LexGrid
model. If 'association' is specified, each data type
property is recorded in LexGrid as
an entity-to-entity relationship. If 'conceptProperty' is
specified, traditional
LexGrid properties are created and assigned directly to new
entities . If 'both'
is specified, both entity relationships and standard
LexGrid entity properties
are generated. The default is 'both'.
Parameters:
datatypePropSwitch - the value of field
'datatypePropSwitch'.
setIsDBXrefRepform
public void setIsDBXrefRepform(java.lang.Boolean isDBXrefRepform)
Sets the value of field 'isDBXrefRepform'. The field
'isDBXrefRepform' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference) and source, this preference allows for
identification of representational
form cross reference information in xml element text. If
not specified, the default
of 'false' is assumed.
Parameters:
isDBXrefRepform - the value of field 'isDBXrefRepform'.
setIsDBXrefSource
public void setIsDBXrefSource(java.lang.Boolean isDBXrefSource)
Sets the value of field 'isDBXrefSource'. The field
'isDBXrefSource' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference) and source, this preference allows for
identification of ISBN cross
reference information in xml element text. If not
specified, the default
of 'false' is assumed.
Parameters:
isDBXrefSource - the value of field 'isDBXrefSource'.
setMatchConceptCode
public void setMatchConceptCode(java.lang.String matchConceptCode)
Sets the value of field 'matchConceptCode'. The field
'matchConceptCode' has the following description: This
preference allows for entity codes to be derived from a
specific RDF
property. The provided string is interpreted as a regular
expression to be
compared against properties assigned to each processed
class. If a
property name matches the regular expression, the property
value
is assigned as the entity code. If not specified no default
match is
assumed, and the entity code is derived from the RDF
resource name.
Parameters:
matchConceptCode - the value of field 'matchConceptCode'
setMatchConceptStatus
public void setMatchConceptStatus(java.lang.String matchConceptStatus)
Sets the value of field 'matchConceptStatus'. The field
'matchConceptStatus' has the following description: This
preference allows for entity status to be derived from a
specific RDF
property. The provided string is interpreted as a regular
expression to be
compared against properties assigned to each processed
class. If a
property name matches the regular expression, the property
value
is assigned as the entity status. If not specified, the
regular expression
of ('concept_status') is assumed, and if not matched no
status string
is assigned (the isActive boolean flag will still be set
based on
deprecation).
Parameters:
matchConceptStatus - the value of field
'matchConceptStatus'.
setMatchNoopNamespaces
public void setMatchNoopNamespaces(java.lang.String matchNoopNamespaces)
Sets the value of field 'matchNoopNamespaces'. The field
'matchNoopNamespaces' has the following description: This
preference allows for classes to be selectively ignored on
import to LexGrid.
The provided string is interpreted as a regular expression
to be compared
against class namespace. If matched, a counterpart entity
is not created in the
LexGrid coding scheme. If not provided, the expression
'(:|@_:|protege:|xsp:).'
is assumed.
Parameters:
matchNoopNamespaces - the value of field
'matchNoopNamespaces'.
setMatchRootName
public void setMatchRootName(java.lang.String matchRootName)
Sets the value of field 'matchRootName'. The field
'matchRootName' has the following description: This
preference allows for custom declaration of root concepts
for hierarchical
relationships. The provided string is interpreted as a
regular expression to be
compared against the resource name for each class. If
matched, the node is
designated as a root in the supported hierarchy metadata.
If not specified,
root nodes are identified by having a superclass of
owl:thing.
Parameters:
matchRootName - the value of field 'matchRootName'.
setMatchXMLRepformNames
public void setMatchXMLRepformNames(java.lang.String matchXMLRepformNames)
Sets the value of field 'matchXMLRepformNames'. The field
'matchXMLRepformNames' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference), this preference allows for identification of
representational form
names contained by XML fragments embedded within rdf
property text.
The provided string is interpreted as a regular expression
and compared
against the XML tags in each fragment. If not specified,
the default
expression '(term-group)' is assumed.
Parameters:
matchXMLRepformNames - the value of field
'matchXMLRepformNames'.
setMatchXMLSourceNames
public void setMatchXMLSourceNames(java.lang.String matchXMLSourceNames)
Sets the value of field 'matchXMLSourceNames'. The field
'matchXMLSourceNames' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference), this preference allows for identification of
source names contained
by XML fragments embedded within rdf property text. The
provided string is
interpreted as a regular expression and compared against
the XML tags in
each fragment. If not specified, the default expression
'(term-source|def-source)'
is assumed.
Parameters:
matchXMLSourceNames - the value of field
'matchXMLSourceNames'.
setMatchXMLTextNames
public void setMatchXMLTextNames(java.lang.String matchXMLTextNames)
Sets the value of field 'matchXMLTextNames'. The field
'matchXMLTextNames' has the following description: If
processing of complex properties is enabled (see
ProcessComplexProps
preference), this preference allows for identification of
descriptive text contained
by XML fragments embedded within rdf property text. The
provided string is
interpreted as a regular expression and compared against
the XML tags in
each fragment. If not specified, the default expression
'(term-name|def-definition|go-term)'
is assumed.
Parameters:
matchXMLTextNames - the value of field
'matchXMLTextNames'.
Sets the value of field 'prioritizedPresentationNames'.
Parameters:
prioritizedPresentationNames - the value of field
'prioritizedPresentationNames'.
setProcessComplexProps
public void setProcessComplexProps(java.lang.Boolean processComplexProps)
Sets the value of field 'processComplexProps'. The field
'processComplexProps' has the following description:
Indicates whether rdf property text will be evaluated to
detect and process
embedded XML. This is a master switch controlling whether
the MatchXML
and isDBXRef preferences are acknowledged. The default is
false.
Parameters:
processComplexProps - the value of field
'processComplexProps'.
setPropnamePrimitive
public void setPropnamePrimitive(java.lang.String propnamePrimitive)
Sets the value of field 'propnamePrimitive'. The field
'propnamePrimitive' has the following description: Entities
can be assigned a property that indicates whether or not it
is
considered primitive (having no equivalent classes). This
preference controls
the name of the property that is created; the property
value will indicate
true or false. If not specified, the name 'primitive' is
assumed.
Parameters:
propnamePrimitive - the value of field
'propnamePrimitive'.
setPropnameType
public void setPropnameType(java.lang.String propnameType)
Sets the value of field 'propnameType'. The field
'propnameType' has the following description: Anonymous OWL
classes of type OWLNAryLogicalClass can be assigned
properties that indicate the nature or type of component
logical operations.
This preference controls the name of the property that is
created; the
property value will indicate the logical operation (e.g.
owl:oneOf). If not
specified, the name 'type' is assumed.
Parameters:
propnameType - the value of field 'propnameType'.
setStrictOWLImplementation
public void setStrictOWLImplementation(java.lang.Boolean strictOWLImplementation)
Sets the value of field 'strictOWLImplementation'. The field
'strictOWLImplementation' has the following description:
Controls the relationship between restrictions of anonymous
classes and parent concepts.
If true, restrictions for anonymous classes are not
connected to the parent concepts.
The default is false.
Parameters:
strictOWLImplementation - the value of field
'strictOWLImplementation'.
Copyright: (c) 2004-2006 Mayo Foundation for Medical Education and Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the triple-shield Mayo logo are trademarks and service marks of MFMER.