edu.mayo.informatics.resourcereader.obo
Class OBOHeader
java.lang.Object
edu.mayo.informatics.resourcereader.core.impl.Resource
edu.mayo.informatics.resourcereader.obo.OBO
edu.mayo.informatics.resourcereader.obo.OBOHeader
- All Implemented Interfaces:
- ResourceHeader, TopResource
public class OBOHeader
- extends OBO
- implements ResourceHeader
The class is used to store the header information found in a OBO version 1.2
format file.
- Version:
- subversion $Revision: $ checked in on $Date: $
- Author:
- Deepak Sharma
Fields inherited from class edu.mayo.informatics.resourcereader.obo.OBO |
logger |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
OBOHeader
public OBOHeader(CachingMessageDirectorIF rLogger)
getIdSpaceMappings
public java.util.Vector<java.lang.String> getIdSpaceMappings()
- Returns:
- Returns the idSpaceMappings.
setSupportedIdSpaceMappings
public void setSupportedIdSpaceMappings(java.util.Vector<java.lang.String> idSpaceMappings)
- Parameters:
idSpaceMappings
- The supportedIdSpaceMappings to set.
getFormatVersion
public java.lang.String getFormatVersion()
- Returns:
- Returns the formatVersion.
setFormatVersion
public void setFormatVersion(java.lang.String formatVersion)
- Parameters:
formatVersion
- The formatVersion to set.
getOntologyVersion
public java.lang.String getOntologyVersion()
- Returns:
- Returns the ontologyVersion.
setOntologyVersion
public void setOntologyVersion(java.lang.String ontologyVersion)
- Parameters:
ontologyVersion
- The ontologyVersion to set.
getSavedBy
public java.lang.String getSavedBy()
- Returns:
- Returns the savedBy.
setSavedBy
public void setSavedBy(java.lang.String savedBy)
- Parameters:
savedBy
- The savedBy to set.
getSupportedSubsets
public java.util.Vector<java.lang.String> getSupportedSubsets()
- Returns:
- Returns the supportedSubsets.
setSupportedSubsets
public void setSupportedSubsets(java.util.Vector<java.lang.String> supportedSubsets)
- Parameters:
supportedSubsets
- The supportedSubsets to set.
getSupportedSynonyms
public java.util.Vector<java.lang.String> getSupportedSynonyms()
- Returns:
- Returns the supportedSynonyms.
setSupportedSynonyms
public void setSupportedSynonyms(java.util.Vector<java.lang.String> supportedSynonyms)
- Parameters:
supportedSynonyms
- The supportedSynonyms to set.
getUpdateDate
public java.lang.String getUpdateDate()
- Returns:
- Returns the updateDate.
setUpdateDate
public void setUpdateDate(java.lang.String updateDate)
- Parameters:
updateDate
- The updateDate to set.
getResourceType
public ResourceType getResourceType()
- Specified by:
getResourceType
in interface ResourceHeader
getImportedOntologies
public java.util.Vector<java.net.URI> getImportedOntologies()
- Returns:
- Returns the importedOntologies.
setImportedOntologies
public void setImportedOntologies(java.util.Vector<java.net.URI> importedOntologies)
- Parameters:
importedOntologies
- The importedOntologies to set.
getDefaultRelationshipIDPrefix
public java.lang.String getDefaultRelationshipIDPrefix()
- Returns:
- Returns the defaultRelationshipIDPrefix.
setDefaultRelationshipIDPrefix
public void setDefaultRelationshipIDPrefix(java.lang.String defaultRelationshipIDPrefix)
- Parameters:
defaultRelationshipIDPrefix
- The defaultRelationshipIDPrefix to set.
getSupportedIdMappings
public java.util.Vector<java.lang.String> getSupportedIdMappings()
- Returns:
- Returns the supportedIdMappings.
setSupportedIdMappings
public void setSupportedIdMappings(java.util.Vector<java.lang.String> supportedIdMappings)
- Parameters:
supportedIdMappings
- The supportedIdMappings to set.
getRemarks
public java.lang.String getRemarks()
- Returns:
- Returns the remarks.
setRemarks
public void setRemarks(java.lang.String remarks)
- Parameters:
remarks
- The remarks to set.
isHeaderFilled
public boolean isHeaderFilled()
- Returns:
- Returns the isHeaderFilled.
setHeaderFilled
public void setHeaderFilled(boolean isHeaderFilled)
- Parameters:
isHeaderFilled
- The isHeaderFilled to set.
containsSubsetName
public boolean containsSubsetName(java.lang.String subsetName)
toString
public java.lang.String toString()
- Overrides:
toString
in class java.lang.Object
getDefaultNameSpace
public java.lang.String getDefaultNameSpace()
setDefaultNameSpace
public void setDefaultNameSpace(java.lang.String defaultNameSpace)