org.LexGrid.LexBIG.admin
Class ExportOBO

java.lang.Object
  extended by org.LexGrid.LexBIG.admin.ExportOBO

public class ExportOBO
extends java.lang.Object

Exports content from the repository to a file in the Open Biomedical Ontologies (OBO) format.

 Example: java org.LexGrid.LexBIG.admin.ExportOBO
   -out,--output <uri> URI or path of the directory to contain the
        resulting OBO file.  The file name will be automatically derived
        from the coding scheme name.   
   -u,--urn <name> URN or local name of the coding scheme to export.
   -v,--version <id> The assigned tag/label or absolute version
        identifier of the coding scheme.
   -f,--force If specified, allows the destination file to be
        overwritten if present.
 
 Note: If the URN and version values are unspecified, a
 list of available coding schemes will be presented for
 user selection.
 
 Example: java -Xmx512m -cp lgRuntime.jar
  org.LexGrid.LexBIG.admin.ExportOBO -out "file:///path/to/dir"
      -u "FBbt" -v "PRODUCTION" -f
 

Author:
Thomas Johnson

Constructor Summary
ExportOBO()
           
 
Method Summary
static void main(java.lang.String[] args)
           
 void run(java.lang.String[] args)
          Primary entry point for the program.
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

ExportOBO

public ExportOBO()
Method Detail

main

public static void main(java.lang.String[] args)

run

public void run(java.lang.String[] args)
         throws java.lang.Exception
Primary entry point for the program.

Throws:
java.lang.Exception

Copyright: (c) 2004-2006 Mayo Foundation for Medical Education and Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the triple-shield Mayo logo are trademarks and service marks of MFMER.