edu.mayo.informatics.resourcereader.obo
Class OBOTerm

java.lang.Object
  extended by edu.mayo.informatics.resourcereader.core.impl.Resource
      extended by edu.mayo.informatics.resourcereader.obo.OBO
          extended by edu.mayo.informatics.resourcereader.obo.OBOEntity
              extended by edu.mayo.informatics.resourcereader.obo.OBOTerm
All Implemented Interfaces:
ResourceEntity, TopResource

public class OBOTerm
extends OBOEntity

The class stores information about a OBO Term

Version:
subversion $Revision: $ checked in on $Date: $
Author:
Deepak Sharma

Field Summary
 java.util.Vector<java.lang.String> subset
           
 
Fields inherited from class edu.mayo.informatics.resourcereader.obo.OBOEntity
altIds, comment, consider, created_by, creation_date, dbXrefs, definition, definitionSources, id, isAnonymous, isObsolete, name, namespace, prefix, replacedBy, synonyms
 
Fields inherited from class edu.mayo.informatics.resourcereader.obo.OBO
logger
 
Constructor Summary
OBOTerm(CachingMessageDirectorIF rLogger)
           
 
Method Summary
 void addRelationship(java.lang.String relation, java.lang.String target)
           
 java.util.Hashtable<java.lang.String,java.util.Vector<java.lang.String>> getRelationships()
           
 java.util.Vector<java.lang.String> getSubset()
           
 boolean isReady()
           
 java.lang.String printIt()
           
 void setSubset(java.util.Vector<java.lang.String> subset)
           
 java.lang.String toString()
           
 
Methods inherited from class edu.mayo.informatics.resourcereader.obo.OBOEntity
getAltIds, getComment, getConsider, getCreated_by, getCreation_date, getDbXrefs, getDefinition, getDefinitionSources, getId, getName, getNamespace, getPrefix, getReplacedBy, getSynonyms, isAnonymous, isObsolete, merge, setAltIds, setAnonymous, setComment, setConsider, setCreated_by, setCreation_date, setDbXrefs, setDefinition, setDefinitionSources, setId, setName, setNamespace, setObsolete, setPrefix, setReplacedBy, setSynonyms
 
Methods inherited from class edu.mayo.informatics.resourcereader.core.impl.Resource
getLogger, setLogger
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Field Detail

subset

public java.util.Vector<java.lang.String> subset
Constructor Detail

OBOTerm

public OBOTerm(CachingMessageDirectorIF rLogger)
Method Detail

isReady

public boolean isReady()

getRelationships

public java.util.Hashtable<java.lang.String,java.util.Vector<java.lang.String>> getRelationships()

addRelationship

public void addRelationship(java.lang.String relation,
                            java.lang.String target)

toString

public java.lang.String toString()
Overrides:
toString in class java.lang.Object

printIt

public java.lang.String printIt()

getSubset

public java.util.Vector<java.lang.String> getSubset()

setSubset

public void setSubset(java.util.Vector<java.lang.String> subset)

Copyright: (c) 2004-2006 Mayo Foundation for Medical Education and Research (MFMER). All rights reserved. MAYO, MAYO CLINIC, and the triple-shield Mayo logo are trademarks and service marks of MFMER.