org.LexGrid.LexBIG.Impl.function.query
Class TestOrphanedConcept

java.lang.Object
  extended by junit.framework.Assert
      extended by junit.framework.TestCase
          extended by org.LexGrid.LexBIG.Impl.function.LexBIGServiceTestCase
              extended by org.LexGrid.LexBIG.Impl.function.query.TestOrphanedConcept
All Implemented Interfaces:
junit.framework.Test

public class TestOrphanedConcept
extends LexBIGServiceTestCase

This testcase checks that the hierarchy api works as desired.

Author:
Pradip Kanjamala

Field Summary
 
Fields inherited from class org.LexGrid.LexBIG.Impl.function.LexBIGServiceTestCase
AIR_SCHEME, AIR_URN, AIR_VERSION, AMINOACID_SCHEME, AMINOACID_VERSION, AUTO_EXPORT_SCHEME, AUTO_EXPORT_URI, AUTO_EXPORT_VERSION, AUTO_SCHEME, AUTO_URN, AUTO_VERSION, CAMERA_SCHEME_MANIFEST, CAMERA_SCHEME_MANIFEST_URN, CAMERA_SCHEME_MANIFEST_VERSION, CELL_SCHEME, CELL_URN, CELL_VERSION, HL7_SCHEME, HL7_VERSION, MAPPING_SCHEME_URI, MAPPING_SCHEME_VERSION, META_SCHEME, META_SCHEME_MANIFEST, META_SCHEME_MANIFEST_URN, META_SCHEME_MANIFEST_VERSION, META_URN, META_VERSION, OVARIANMASS_SCHEME_URN, OVARIANMASS_SCHEME_VERSION, PARTS_NAMESPACE, PARTS_SCHEME, PARTS_URN, PARTS_VERSION, PIZZA_SCHEME_NAME, PIZZA_SCHEME_URI, PIZZA_SCHEME_VERSION, SAMPLE_META_VERSION, THES_SCHEME, THES_URN, THES_VERSION
 
Constructor Summary
TestOrphanedConcept()
           
 
Method Summary
protected  java.lang.String getTestID()
          To be implemented by each descendant testcase.
 void testOrphanedConceptGenericOwl()
          Test getting the root concept of when using the generic owl loader
 void testOrphanedConceptOBO()
          Test getting the root concept of an OBO ontology
 void testOrphanedConceptUMLS()
          Test getting the root concept of an OBO ontology
 
Methods inherited from class junit.framework.TestCase
countTestCases, createResult, getName, run, run, runBare, runTest, setName, setUp, tearDown, toString
 
Methods inherited from class junit.framework.Assert
assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertFalse, assertFalse, assertNotNull, assertNotNull, assertNotSame, assertNotSame, assertNull, assertNull, assertSame, assertSame, assertTrue, assertTrue, fail, fail, failNotEquals, failNotSame, failSame, format
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

TestOrphanedConcept

public TestOrphanedConcept()
Method Detail

getTestID

protected java.lang.String getTestID()
Description copied from class: LexBIGServiceTestCase
To be implemented by each descendant testcase.

Specified by:
getTestID in class LexBIGServiceTestCase
Returns:
String

testOrphanedConceptOBO

public void testOrphanedConceptOBO()
                            throws java.lang.InterruptedException,
                                   LBException
Test getting the root concept of an OBO ontology

Throws:
java.lang.InterruptedException
LBException

testOrphanedConceptUMLS

public void testOrphanedConceptUMLS()
                             throws java.lang.InterruptedException,
                                    LBException
Test getting the root concept of an OBO ontology

Throws:
java.lang.InterruptedException
LBException

testOrphanedConceptGenericOwl

public void testOrphanedConceptGenericOwl()
                                   throws java.lang.InterruptedException,
                                          LBException
Test getting the root concept of when using the generic owl loader

Throws:
java.lang.InterruptedException
LBException

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