edu.mayo.informatics.resourcereader.obo
Class OBOContents
java.lang.Object
edu.mayo.informatics.resourcereader.core.impl.Resource
edu.mayo.informatics.resourcereader.obo.OBO
edu.mayo.informatics.resourcereader.obo.OBOContents
- All Implemented Interfaces:
- ResourceContents, TopResource
public class OBOContents
- extends OBO
- implements ResourceContents
The class that is used to store the OBO Contents
- Version:
- subversion $Revision: $ checked in on $Date: $
- Author:
- Deepak Sharma, Pradip Kanjamala
Fields inherited from class edu.mayo.informatics.resourcereader.obo.OBO |
logger |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
OBOContents
public OBOContents(CachingMessageDirectorIF rLogger)
init
public void init(CachingMessageDirectorIF rLogger)
getConcepts
public java.util.Collection<OBOTerm> getConcepts()
- The function returns a Collection of OBOTerm
- Specified by:
getConcepts
in interface ResourceContents
getRelations
public java.util.Collection<OBORelation> getRelations()
- The function returns a Collection of OBORelation
- Specified by:
getRelations
in interface ResourceContents
getInstances
public java.util.Collection<OBOInstance> getInstances()
- The function returns a Collection of OBOInstance
getOBOAbbreviations
public OBOAbbreviations getOBOAbbreviations()
setOBOAbbreviations
public void setOBOAbbreviations(OBOAbbreviations sourceAbbreviations)
getOBORelations
public OBORelations getOBORelations()
setOBORelations
public void setOBORelations(OBORelations relations)
getOBOTerms
public OBOTerms getOBOTerms()
setOBOTerms
public void setOBOTerms(OBOTerms terms)
getOBOInstances
public OBOInstances getOBOInstances()
setOBOInstances
public void setOBOInstances(OBOInstances instances)
toString
public java.lang.String toString()
- Overrides:
toString
in class java.lang.Object